API

Preprocessing

Datasets

datasets.SelexDataset(df[, n_rounds, ...])
datasets.PBMDataset(df[, ...])
datasets.ResiduePBMDataset(df, msa_onehot[, ...])
datasets.GenomicsDataset(df[, ...])

Tools

Plotting

pl.logo(model[, figsize, flip, log, mode, ...])
pl.loss(model)
pl.kmer_enrichment(model, train[, k, ...])
pl.R2_per_protein(model, dataloader, device)
pl.R2_calculation(model, train[, show])

Models

models.Mubind(datatype, **kwargs)

Implements the MUBIND model.